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ATLAS

Exploring the geometry of knowledge. Testing where structure helps—and where it doesn’t.

TECHNOLOGIES / CONCEPTS

Python / Graph retrieval / Persistent topology / Wasmtime

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01 / THE QUESTION

Can graph structure or persistent topology improve multi-hop retrieval beyond semantic similarity?

INTERACTIVE WORKFLOW

ATLAS / test the structural hypothesis

01 / 06

The experimental route adds graph and topology features. The selected V2 cosine-only configuration bypasses those stages after validation found no replicated benefit.

Dashed connection: selected cosine baseline bypasses experimental reranking. Solid connection: experimental comparison path.

Documented experiment

Query

Evaluate a question against a fixed corpus; shared-support components separate internal splits.

STAGE OUTPUT

Question + corpus

Reduced motion · explore stages manually
V2 evidence report ↗
Read the complete workflow
  1. Query

    Evaluate a question against a fixed corpus; shared-support components separate internal splits.

    Documented experiment · Output: Question + corpus
  2. Embedding

    Encode query and documents into a shared semantic representation for cosine comparison.

    Documented method · Output: Embedding vectors
  3. Baseline retrieval

    Exact cosine similarity produces the baseline ranking. The selected V2 path goes directly to evaluation.

    Selected primary path · Output: Cosine ranked candidates
  4. Graph / topology

    Compare graph, topology-only and combined experimental reranking against the unchanged baseline.

    Experimental / bypassed in primary · Output: Experimental rankings
  5. Evaluation

    Measure all-support@5 on held-out HotpotQA and MuSiQue subsets using shared evaluation rules.

    Repository-reported evidence · Output: Saved rankings + metrics
  6. Results

    Cosine scores 0.5100 on HotpotQA versus 0.4700 for graph + topology. No replicated confirmatory improvement was established.

    Not independently reproduced · Output: Negative finding + uncertainty

MEASURED EVIDENCE / REPOSITORY-REPORTED

The simpler baseline held up.

Held-out all-support@5: the fraction of questions with every gold supporting document in the first five retrieved results. Higher is better.

ALL-SUPPORT@5 / FIXED 0–1 SCALE

Cosine0.5100
Graph0.4875
Topology only0.4900
Graph + topology0.4700

Repository-reported point estimates. Bars do not establish statistical significance; see the linked report for uncertainty intervals. No replicated improvement was established.

Final internal held-out subsets · exact retrieval
MethodHotpotQA · n=400MuSiQue · n=300
Cosine0.51000.1767
Graph0.48750.1600
Topology only0.49000.1800
Graph + topology0.47000.1467

No replicated confirmatory improvement was established. The small MuSiQue topology-only point difference is not an established advantage.

Public development-data subsets, not official hidden-test or fullwiki scores. No answer generation was evaluated. Measurements have not been independently rerun for this portfolio.

Methods, uncertainty intervals & raw evidence ↗
02 / HYPOTHESIS

What the study tests

Graph structure and persistent topology might improve multi-hop all-support retrieval over cosine similarity. The reported comparisons did not establish that improvement.

02 / IMPLEMENTATION

Methodology and algorithms

A reproducible research pipeline compares semantic, graph, topology-only and combined retrieval. Separate local TIP and S-MCP prototypes explore region matching and constrained compute-to-data.

03 / ENGINEERING DECISIONS

Controls and comparisons

The V2 configuration keeps the simpler cosine-only path after validation. Losing configurations and shuffled-feature controls remain part of the research record.

04 / EVIDENCE

What the results say

The repository reports HotpotQA all-support@5 of 0.5100 for cosine and 0.4700 for graph + topology (400 held-out questions). The tested additions did not establish a replicated improvement. These reported measurements have not been independently rerun for this portfolio.

05 / LIMITATIONS

Where the evidence ends

Internal held-out subsets of public development data; no fullwiki or official hidden-test claim. Local prototypes establish neither privacy guarantees nor production security.

06 / VALIDATION

Tests and validation

V2 tests exercise retrieval and evaluation logic. The report retains cosine, graph-only, topology-only and combined results on HotpotQA and MuSiQue internal held-out subsets.

07 / REPRODUCIBILITY

Reproduce the investigation

Follow docs/REPRODUCING.md and research/v2/PROTOCOL.md. Preserve dataset splits, feature configuration, shuffled-feature controls and evaluation rules; compare the committed report before interpreting new runs.

Source reviewed 17 October 2026. Summaries describe repository evidence; they do not assert sole authorship or independent reproduction.

Read the source documentation ↗

Credit belongs to the repository’s contributors. Account or organization ownership does not establish sole authorship; individual contribution boundaries have not been verified.

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